Kinematic Self-Replicating Machines

© 2004 Robert A. Freitas Jr. and Ralph C. Merkle. All Rights Reserved.

Robert A. Freitas Jr., Ralph C. Merkle, Kinematic Self-Replicating Machines, Landes Bioscience, Georgetown, TX, 2004.


 

References 2500-2599

2500. B. Blum, N. Bakalara, L. Simpson, “A model for RNA editing in kinetoplastid mitochondria: ‘guide’ RNA molecules transcribed from maxicircle DNA provide the edited information,” Cell 60(26 January 1990):189-198; N.R. Sturm, L. Simpson, “Kinetoplast DNA minicircles encode guide RNAs for editing of cytochrome oxidase subunit III mRNA,” Cell 61(1 June 1990):879-884; T.L. Horton, L.F. Landweber, “Rewriting the information in DNA: RNA editing in kinetoplastids and myxomycetes,” Curr. Opin. Microbiol. 5(December 2002):620-626.

2501. M. Schaub, W. Keller, “RNA editing by adenosine deaminases generates RNA and protein diversity,” Biochimie 84(August 2002):791-803.

2502. K. Stuart, A.K. Panigrahi, “RNA editing: complexity and complications,” Mol. Microbiol. 45(August 2002):591-596.

2503. R. Benne, J. Van den Burg, J.P. Brakenhoff, P. Sloof, J.H. Van Boom, M.C. Tromp, “Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA,” Cell 46(12 September 1986):819-826.

2504. Robert Benne, ed., RNA Editing: The Alteration of Protein Coding Sequences of RNA, Ellis Horwood Ltd., 1993.

2505. S.D. Seiwert, K. Stuart, “RNA editing: transfer of genetic information from gRNA to precursor mRNA in vitro,” Science 266(7 October 1994):114-117.

2506. A.M. Estevez, L. Simpson, “Uridine insertion/deletion RNA editing in trypanosome mitochondria – a review,” Gene 240(29 November 1999):247-260.

2507. L. Simpson, S. Sbicego, R. Aphasizhev, “Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business,” RNA 9(March 2003):265-276.

2508. H. Lomeli, J. Mosbacher, T. Melcher, T. Hoger, J.R. Geiger, T. Kuner, H. Monyer, M. Higuchi, A. Bach, P.H. Seeburg, “Control of kinetic properties of AMPA receptor channels by nuclear RNA editing,” Science 266(9 December 1994):1709-1713.

2509. Hiroki Sayama, personal communication to Robert A. Freitas Jr., 22 October 2003.

2510. G. Paun, “Computing with membranes,” J. Comp. Syst. Sci. 61(2000):108-143.

2511. A. Calinescu, J. Efstathiou, S. Sivadasan, J. Schirn, L. Huaccho Huatuco, “Complexity in manufacturing: an information theoretic approach,” Proc. Intl. Conf. on Complexity and Complex Systems in Industry, 19-20 September 2000, The University of Warwick, 2000, pp. 30-44; http://www.robots.ox.ac.uk/~manufsys/warwick_calinescu.ps. See Manufacturing Systems Group website at http://www.robots.ox.ac.uk/~manufsys/

2512. Michael New, Charles Blackwell, Kagan Tumer, Dimitris Stassinopoulos, “Who or what? Replication of identities or functions,” Poster Presentation, Second Astrobiology Science Conference, NASA/AMES Research Center, 7-11 April 2002; http://www.astrobiology.com/asc2002/abstract.html?ascid=311

2513. K.N. Laland, J. Odling-Stone, M.W. Feldman, “Niche construction, biological evolution, and cultural change,” Behav. Brain Sci. 23(2000):131-175.

2514. B. Adams, H. Lipson, “A universal framework for self replication,” 7th European Conference on Artificial Life (ECAL 2003), 14-17 September 2003, Dortmund, Germany, 2003, pp. 1-9; http://ls11-www.cs.uni-dortmund.de/people/ziegler/ecal2003/accepted/118.html (abstract) and http://www.mae.cornell.edu/lipson/papers/selfrep.pdf (paper)

2515. Rok Sosic, Robert R. Johnson, “Computational properties of self-reproducing growing automata,” BioSystems 36(1995):7-17;
http://www.cit.gu.edu.au/~sosic/abstracts/biosystems95.html (abstract) and http://www.cit.gu.edu.au/~sosic/papers/biosystems95.ps.Z (paper)

2516. Wil McCarthy, Hacking Matter: Levitating Chairs, Quantum Mirages, and the Infinite Weirdness of Programmable Atoms, Basic Books, New York, 2003.

2517. Jack W. Szostak, “Constraints on the sizes of the earliest cells,” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel4szostak.htm

2518. H.V. Chetverina, A.B. Chetverin, “Cloning of RNA molecules in vitro,” Nucleic Acids Res. 21(25 May 1993):2349-2353.

2519. D.S. Tawfik, A.D. Griffiths, “Man-made cell-like compartments for molecular evolution,” Nat. Biotechnol. 16(July 1998):652-656.

2520. E. Olavi Kajander, Mikael Bjorklund, Neva Ciftcioglu, “Suggestions from observations on nanobacteria isolated from blood,” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel2kajander.htm

2521. James L. Van Etten, “Can large dsDNA-containing viruses provide information about the minimal genome size required to support life?” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel2vanetten.htm

2522. H. Chen, I.M. Keseler, L.J. Shimkets, “Genome size of Myxococcus xanthus determined by pulsed-field gel electrophoresis,” J. Bacteriol. 172(1990):4206-4213.

2523. Jean-Michel Claverie, “What if there are only 30,000 human genes?” Science 291(16 February 2001):1255-1257; see also http://www.airbus.com/.

2524. Michael W.W. Adams, “The influence of environment and metabolic capacity on the size of a microorganism,” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel2adams.htm

2525. Lothar Steidler, Sabine Neirynck, Nathalie Huyghebaert, Veerle Snoeck, An Vermeire, Bruno Goddeeris, Eric Cox, Jean Paul Remon, Erik Remaut, “Biological containment of genetically modified Lactococcus lactis for intestinal delivery of human interleukin 10,” Nature Biotechnology (15 June 2003).

2526. P. Segers, M. Vancanneyt, B. Pot, U. Toruck, B. Hoste, D. Dewettinck, E. Falsen, K. Kersters, P. DeVos, “Classification of Pseudomonas diminuta Leifson and Hugh 1954 and Pseudomonas vesicularis Busing, Doll, and Freytag 1953 in Brevundimonas gen. nov. as Brevundimonas diminuta comb. nov. and Brevundimonas vesicularis comb. nov., respectively,” Int. J. Syst. Bacteriol. 44(1994):499-510.

2527. D.K. Button, Betsy Robertson, “Properties of small free-living aquatic bacteria,” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel2button.htm

2528. J.J.Y. Joel, X. Cui, J. Reizer, M.H.J. Saier, “Regulation of the glucose: H+ symporter by metabolite-activated ATP-dependent phosphorylation of HPr in Lactobacillus brevis,” J. Bacteriol. 176(1994):3484-3492.

2529. Donald A. Bryant, ed., The Molecular Biology of Cyanobacteria, Kluwer Academic Publishers, New York, 1995; P. Fay, C. Van Baalen, eds., Cyanobacteria: A Comprehensive Review, Elsevier Science Ltd., 1987.

2530. David L. Herrin, “Lecture 8: Nuclear genome of plants,” Bio350M/Bio388M, Plant Molecular Biology, University of Texas, Fall 2002; http://www.esb.utexas.edu/bot350m/lecnotes/Nucleargen1.ppt

2531. Aristides Requicha, personal communication to Robert A. Freitas Jr., 29 September 2003.

2532. Gunter P. Wagner, “Adaptation and the Modular Design of Organisms,” Center for Computational Ecology, Yale University, New Haven, CT, 1995; http://www.cbc.yale.edu/old/cce/papers/ALife/alife.html

2533. E. Szathmary, L. Wolpert, “The evolution of multicellularity,” in P. Hammerstein, ed., Genetic and Social Mechanisms of Cooperation, MIT Press, Cambridge, MA, 2003.

2534. A. Wilkins, The Evolution of Developmental Pathways, Sinauer Associates, Sunderland, MA, 2002.

2535. Chris Langton, personal communication to Robert A. Freitas Jr., 7 October 2003.

2536. C. Gans, R.G. Northcutt, “Neural crest and the origin of vertebrates: A new head,” Science 220(1983):268-274.

2537. M.J. Zigmond, F.E. Bloom, S.C. Landis, J.L. Roberts, L.R. Squire, eds., Fundamental Neuroscience, Academic Press, London, 1999.

2538. E. Marin, G.S.X.E. Jeffries, T. Komiyama, H. Zhu, L. Luo, “Representation of the glomerular olfactory map in the Drosophila brain,” Cell 109(2002):243-255.

2539. Dan G. Fraenkel, “Metabolism and physiology of conventional bacteria,” in Space Studies Board, Size Limits of Very Small Microorganisms: Proceedings of a Workshop, National Research Council, National Academy Press, Washington DC, 1999; http://www.nationalacademies.org/ssb/nanopanel1fraenkel.htm

2540. Geoffrey B. West, James H. Brown, Brian J. Enquist, “A general model for the origin of allometric scaling laws in biology,” Science 276(4 April 1997):122-126. See also: G.B. West et al, "The fourth dimension of life, fractal geometry, and allometric scaling of organisms," Science, 284(1999):1677-1679; G.B. West et al, "Allometric scaling of metabolic rate from molecules and mitochondria to cells and mammals," Proc. Natl. Acad. Sci. (USA) 99(2002):2473-2478.

2541. T. Fenchel, “Intrinsic rate increase: the relationship with body size,” Oecologia 14(1974):317-326.

2542. Roger M. Knutson, Fearsome Fauna: A Field Guide to the Creatures Who Live in You, W.H. Freeman and Company, New York, 1999.

2543. “Section 2403: Deposit of Biological Material (37 CFR 1.801 Biological Material)” and “Section 2403.01: Material Capable of Self-Replication,” Manual of Patent Examining Procedure, Rev. 3, 6th Edition, Office of Classification Support, U.S. Patent and Trademark Office; http://www.internet-patents.com/Manual%20PEP/411.htm

2544. Zachary Mason, “Programming with stigmergy: using swarms for construction,” in Russell K. Standish, Hussein A. Abbass, Mark A. Bedau, eds., Artificial Life VIII, 8th Intl. Conf. on the Simulation and Synthesis of Living Systems, University of New South Wales, Australia, 9-13 December 2002, MIT Press, Cambridge, MA, 2000, pp. 371-374; http://parallel.acsu.unsw.edu.au/complex/alife8/proceedings/sub2157.pdf

2545. P. Gonczy, et al, “Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III,” Nature 408(2000):331-336.

2546. J.C. King, “The risk of maternal nutritional depletion and poor outcomes increases in early or closely spaced pregnancies,” J. Nutr. 133(May 2003):1732S-1736S.

2547. H. Sohma, “Pregnancy and the teeth,” Shigaku. 50(December 1962):199-201 (in Japanese); A. Prochonczukow, “Effect of pregnancy on the protein metabolism in the teeth and jaws,” Czas. Stomatol. 19(May 1966):491-495 (in Polish); F. Frumento, “Behavior of some mineral-ion components of teeth during pregnancy,” Riv. Ital. Stomatol. 21(July 1966):705-711 (in Italian); M. Orosz, K. Gabris, T. Zelles, “Longitudinal study of gums and teeth during pregnancy,” Fogorv. Sz. 73(January 1980):18-21 (in Hungarian); Jason S. Kasarsky, “Dental Health During Pregnancy: Tooth Loss and Decay,” January 2004; http://www.jkdds.com/html/dental_health_during_pregnancy.html

2548. D. Fitzsimons, J.T. Dwyer, C. Palmer, L.D. Boyd, “Nutrition and oral health guidelines for pregnant women, infants and children,” J. Am. Diet. Assoc. 98(February 1998):182-186, 189; J. Am. Diet. Assoc. 98(March 1998):264 (erratum). See also: C. Crawley, “A Tooth for Every Child?” FNH 8-9 Dental Health, FACS Extension, College of Family and Consumer Sciences, University of Georgia, March 1998, http://www.fcs.uga.edu/extension/internal/fcsnews/3-98/18.html; Alan Green, “Pregnancy and Natural Dentistry,” 2002, http://kimberley.rivero.com/test/article_pregnancy.htm; Craig Segal, “The Truth About Old Wives’ Tales: Teeth,” Reader’s Digest Canada, 2003, http://www.readersdigest.ca/mag/2001/12/wives.html; Crystal Dupay, “Pregnancy and Your Oral Health,” 2003, http://www.mainstreetmom.com/preg_oral_health.htm; Allyson K. Hurley, “Watch Your Mouth: Part 1,” 2004, http://www.allysonhurley.com/articles.html; Rajiv S. Khosla, “Pregnancy and Dentistry,” Mumbai, India, 2004, http://www.geocities.com/drkhosla1/pregnancy.html

2549. “In Depth: Calcium and Pregnancy. Your Unborn Child Will Draw the Calcium It Needs From Your Body,” Consumer Healthcare Research & Development, GlaxoSmithKline, CALCIUMinfo.com, The Online Calcium Information Resource, 2004; http://www.calciuminfo.com/pages/2_3preg.htm. See also: Dan Peterson, “Dental Health Tips for Pregnancy,” DentalNotes, Winter 2002; http://www.dentalgentlecare.com/new_page_17.htm. See also: Lt. Col. Henry Greene, “Dental Care Myths,” Scott Fall Newsletter, Army News Service, 24 January 2000; and at: “Sub-Section 1.10. Dental Care, 1-333: Dental Care Myths,” General Health Information, USAF Retiree Activities Office, 28 March 2002; http://public.scott.amc.af.mil/375aw/rao/Section1/SSec1.10.htm#1-333, http://www.geocities.com/alpost42/files/rao112.htm, http://www.post593.org/RAO/DENTAL%20CARE%20Myths.htm, and http://www.drhledin.com/dentalmyths.htm

2550. W.M. Ringsdorf Jr., R.F. Flatland, K.G. Lindsey, E. Cheraskin, “Clinical tooth mobility and pregnancy,” Obstet. Gynecol. 17(April 1961):434-438; K.H. Rateitschak, “Tooth mobility changes in pregnancy,” J. Periodontal Res. 2(1967):199-206; E. Hellsing, L. Hammarstrom, “The effects of pregnancy and fluoride on orthodontic tooth movements in rats,” Eur. J. Orthod. 13(June 1991):223-230.

2551. “Dental Caries. Contributing Factors in Dental Caries: Systemic Factors,” Department of Oral Medicine and Pathology, The University of Alberta, 2004; http://www.dent.ualberta.ca/path/355/Systemic_Factors.html

2552. Steven Parham, “Robotic self-appraisal and reproduction,” Kybernetes 24(1995):34-43; http://www.starjammer.org/downloads/parham.pdf

2553. H. Harris, The Birth of the Cell, Yale University Press, New Haven, CT, 1999.

2554. T.J. Mitchison, E.D. Salmon, “Mitosis: a history of division,” Nature Cell Biol. 3(2001):E17-E22.

2555. Jonathan M. Scholey, Ingrid Brust-Mascher, Alex Mogilner, “Cell division,” Nature 422(17 April 2003):746-752; http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v422/n6933/full/nature01599_fs.html

2556. Eberhard Becker, Willms Buhse, Dirk Gunnewig, Niels Rump, eds., Digital Rights Management: Technological, Economic, and Legal and Political Aspects, Springer-Verlag, New York, 2004.

2557. R.C. Allsopp, E. Chang, M. Kashefi-Aazam, E.I. Rogaev, M.A. Piatyszek, J.W. Shay, C.B. Harley, “Telomere shortening is associated with cell division in vitro and in vivo,” Exp. Cell Res. 220(September 1995):194-200; David Kipling, The Telomere, Oxford University Press, 1997; U. Friedrich, E. Griese, M. Schwab, P. Fritz, K. Thon, U. Klotz, “Telomere length in different tissues of elderly patients,” Mech. Ageing Dev. 119(15 November 2000):89-99. See telomere image at http://www.ornl.gov/TechResources/Human_Genome/graphics/slides/ttelomeres.html

2558. S.C. Stearns, “The influence of size and phylogeny on patterns of covariation among life-history traits in mammals,” Oikos 41(1983):173-187.

2559. John Whitfield, “Westerners breed like 30-tonne gorillas,” Nature ScienceUpdate, 10 April 2003; http://www.nature.com/nsu/030407/030407-9.html

2560. Melanie E. Moses, James H. Brown, “Allometry of human fertility and energy use,” Ecology Letters 6(2003):295-300.

2561. Derek Harter, Max Garzon, “Replication control mechanisms for autonomous computing,” Department of Mathematical Sciences, University of Memphis, 21 September 1999; http://www.msci.memphis.edu/~harterd/RepControlProject/version0/repcontrol/repcontrol.html or http://www.msci.memphis.edu/~harterd/RepControlProject/version0/repcontrol.ps

2562. R.P. Spencer, “Cessation of reproduction: an analytic view of menopause,” Med. Hypotheses 59(October 2002):406-410; A. Vermeulen, “Environment, human reproduction, menopause, and andropause,” Environ. Health Perspect. 101(July 1993):91-100; W.J. Francis, “Reproduction at menarche and menopause in women,” J. Reprod. Fertil. Suppl. 12(March 1970):89-98.

2563. L. Wolff, S. Ruscetti, “Malignant transformation of erythroid cells in vivo by introduction of a nonreplicating retrovirus vector,” Science 228(28 June 1985):1549-1552.

2564. H.E. Gruber, K.D. Finley, R.M. Hershberg, S.S. Katzman, P.K. Laikind, J.E. Seegmiller, T. Friedmann, J.K. Yee, D.J. Jolly, “Retroviral vector-mediated gene transfer into human hematopoietic progenitor cells,” Science 230(29 November 1985):1057-1061.

2565. Ahmed H. Zewail, “Femtochemistry. Past, present, and future,” Pure Appl. Chem. 72(December 2000):2219-2231; http://www.iupac.org/publications/pac/2000/7212/7212pdfs/7212zewail_2219.pdf. See also: Ahmed H. Zewail, “Femtochemistry: atomic-scale dynamics of the chemical bond using ultrafast lasers,” Angew. Chem. Intl. Ed. 39(2000):2586-2631.

2566. Anatoly K. Khitrin, Vladimir L. Ermakov, Bing M. Fung, “Nuclear magnetic resonance molecular photography,” J. Chem. Phys. 117(15 October 2002):6903-6906; http://ermakov.smtp.ru/pdf/ermakov_jcp117p6903.pdf or http://arxiv.org/pdf/quant-ph/0208136. See also: Will Knight, “Digital image stored in single molecule,” NewScientist.com, 1 December 2002; http://www.newscientist.com/news/news.jsp?id=ns99993129, but note http://www.nano-tek.org/sci.nanotech/1547.html

2567. Sergei Aleksandrovich Magnitskii, “Laboratory of Femtotechnology,” http://msuilc.ilc.msu.su/labs/311/311.html; LMU Theoretical Femtoscience Group, http://www.cup.uni-muenchen.de/pc/devivie/index.html

2568. Michael Conrad, “The geometry of evolutions,” BioSystems 24(1990):61-81. See also: Michael Conrad, Adaptability, Plenum Press, New York, 1983.

2569. Lee Altenberg, “Chapter 3. The evolution of evolvability in genetic programming,” in J.Kenneth E. Kinnear, ed., Advances in Genetic Programming, MIT Press, Cambridge, MA, 1994, pp. 47-74; http://dynamics.org/~altenber/PAPERS/EEGP/

2570. John Stewart, “The evolution of genetic cognition,” J. Soc. Evolutionary Syst. 20(1997):53-73; http://www4.tpg.com.au/users/jes999/gencog.htm

2571. P. Hogeweg, “Multilevel evolution: Replicators and the evolution of diversity,” Physica D 75(1994):275-291.

2572. J. Maynard Smith, “How to model evolution,” in J. Dupre, ed., Essays on Evolution and Optimality, MIT Press, Cambridge, MA, 1987, pp. 119-131.

2573. P.M.B. Vitanyi, “Sexually reproducing cellular automata,” Math. Biosci. 18(1973):23-54; P.M.B. Vitanyi, “Genetics of reproducing automata,” Proc. 1974 Conf. on Biologically Motivated Automata Theory, IEEE, New York, 1974, pp. 166-171; P.M.B. Vitanyi, “On a problem in the collective behavior of automata,” Discrete Mathematics 14(1976):99-101.

2574. Ralph Merkle, “The risks of nanotechnology,” in B.C. Crandall, James Lewis, eds., Nanotechnology Research and Perspectives: Papers from the First Foresight Conference on Nanotechnology (October 1989), MIT Press, Cambridge, MA, 1992, pp. 287-294.

2575. J.H. Werren, J.D. Bartos, “Recombination in Wolbachia,” Curr. Biol. 11(20 March 2001):431-435; R. Stouthamer, J.A. Breeuwer, G.D. Hurst, “Wolbachia pipientis: microbial manipulator of arthropod reproduction,” Annu. Rev. Microbiol. 53(1999):71-102; S.P. Sinkins, H.R. Braig, S.L. O’Neill, “Wolbachia superinfections and the expression of cytoplasmic incompatibility,” Proc. R. Soc. Lond. B. Biol. Sci. 261(22 September 1995):325-330; L.D. Hurst, “The evolution of cytoplasmic incompatibility or when spite can be successful,” J. Theoret. Biol. 148(21 January 1991):269-277.

2576. J.H. Werren, D.M. Windsor, “Wolbachia infection frequencies in insects: Evidence of global equilibrium?” Proc. R. Soc. Lond. B. Biol. Sci. 267(7 July 2000):1277-1285; S.R. Bordenstein, F.P. O’Hara, J.H. Werren, “Wolbachia-induced incompatibility precedes other hybrid incompatibilities in Nasonia,” Nature 409(8 February 2001):707-710, 675-677 (comment).

2577. David Blair, “Nature foils poachers as elephants shed tusks,” Daily Telegraph, 24 September 1998; http://www.gaiabooks.co.uk/environment/elephants_tuskless.html

2578. “Hummingbirds, Rattlesnakes and Crayfish,” Casa Nuestra Winery & Vineyards, No. 29, November 2000; http://www.casanuestra.com/journal_29.htm

2579. S. Mitsuhashi, “Drug resistance in bacteria: history, genetics and biochemistry,” J. Int. Med. Res. 21(January-February 1993):1-14.

2580. A.A. Hoffmann, R.J. Hallas, J.A. Dean, M. Schiffer, “Low potential for climatic stress adaptation in a rainforest Drosophila species,” Science 301(4 July 2003):100-102.

2581. Anders Sandberg, “Limiting the evolution of replicators,” http://www.aleph.se/Trans/Tech/Complexity/replicator.html

2582. Meng-Chao Yao, Patrick Fuller, Xiaohui Xi, “Programmed DNA deletion as an RNA-guided system of genome defense,” Science 300(6 June 2003):1581-1584, 1517-1518 (comment).

2583. C.H. Waddington, “Canalization of development and the inheritance of acquired characters,” Nature 150(1942):563.

2584. Elizabeth M. Boon, Alison L. Livingston, Nikolas H. Chmiel, Sheila S. David, Jacqueline K. Barton, “DNA-mediated charge transport for DNA repair,” Proc. Natl. Acad. Sci. (USA) 100(28 October 2003):12543-125437; http://www.pnas.org/cgi/content/full/100/22/12543. See also: M.A. O’Neill, C. Dohno, J.K. Barton, “Direct chemical evidence for charge transfer between photoexcited 2-aminopurine and guanine in duplex DNA,” J. Am. Chem. Soc. 126(11 February 2004):1316-1317.

2585. M. Eigen, W. Gardiner, P. Schuster, R. Winkler-Oswatitsch, “The origin of genetic information,” Sci. Amer. 244(April 1981):78-94.

2586. Dongsu Bak, “Replication error and time evolution of a self-replicating system,” Report No. UOSTP-99-005, 1999; http://arxiv.org/pdf/adap-org/9903005

2587. Martin Nilsson, Nigel Snoad, “Error thresholds for quasi-species on dynamic fitness-landscapes,” Santa Fe Institute, 24 September 1999; http://fy.chalmers.se/~martin/errorthresholds.ps.gz

2588. Orazio Miglino, Richard Walker, “Genetic redundancy in evolving populations of simulated robots,” Artificial Life 8(Summer 2002):265-278; http://mitpress.mit.edu/catalog/item/default.asp?sid=2AC0A07D-41B4-44CE-AB40-CAA5E0D78F32&ttype=6&tid=9232 (abstract)

2589. I. Birol, S.J. Parulekar, F. Teymour, “Effect of environment partitioning on the survival and coexistence of autocatalytic replicators,” Phys. Rev. E Stat. Nonlin. Soft. Matter Phys. 66(November 2002):051916.

2590. S.F. Gilbert, ed., Developmental Biology, 6th edition, Sinauer Associates, Sunderland, MA, 2000, p. 554.

2591. R.P. Ellinson, “Change in developmental patterns: Embryos of amphibians with large eggs,” in R.A. Raff, E.C. Raff, eds., Development as an Evolutionary Process, Alan R. Liss, New York, 1987, pp. 1-21.

2592. S.R. Voss, H.B. Shaffer, “Adaptive evolution via a major gene effect:
Paedomorphosis in the Mexican axolotl,” Proc. Natl. Acad. Sci. (USA) 94(1997):14185-14189.

2593. H. Hoenigsberg, “Cell biology, molecular embryology, Lamarckian and Darwinian selection as evolvability,” Genet. Mol. Res. 2(31 March 2003):7-28.

2594. N.W. Blackstone, A.M. Ellison, “Maximal indirect development, set-aside cells, and levels of selection,” J. Exp. Zool. 288(15 August 2000):99-104; Andrew Ransick, R. Andrew Cameron, Eric H. Davidson, “Postembryonic segregation of the germ line in sea urchins in relation to indirect development,” Proc. Natl. Acad. Sci. (USA) 93(25 June 1996):6759-6763; http://www.pnas.org/cgi/reprint/93/13/6759

2595. H.M. Temin, “Reverse transcriptases. Retrons in bacteria,” Nature 339(25 May 1989):254-255.

2596. J.A. Marcum, “From heresy to dogma in accounts of opposition to Howard Temin’s DNA provirus hypothesis,” Hist. Philos. Life Sci. 24(2002):165-192.

2597. D. Baltimore, “Viral RNA-dependent DNA polymerase. 1970,” Biotechnology 24(1992):3-5.

2598. S.P. Otto, I.M. Hastings, “Mutation and selection within the individual,” Genetica 102-103(1998):507-524.

2599. R. Jain, M.C. Rivera, J.E. Moore, J.A. Lake, “Horizontal gene transfer in microbial genome evolution,” Theor. Popul. Biol. 61(June 2002):489-495.

 


Last updated on 1 August 2005